elearning

The following elearning modules will provide workflows and resources to work on CABANA challenge areas. These challenges are of global significance, but of particular relevance in Latin America: communicable disease, sustainable food production and protection of biodiversity.

Essentials Genomics
Essentials Genomics

This course will guide you through the basic concepts of genome sequencing and assembly.


practic_genom
Practical Genomics: Assembly and Analysis of the Drosophila genome using SPAdes and ALLPATHS-LG

This CABANA e-Learning tutorial will guide you through the practical steps for a de novo genome assembly using NGS data from different sequencing strategies and platforms.

pract_metag
Practical Metagenomics: Analysis and exploration of microbial traits in a wet coffee fermentation experiment using MGnify

This CABANA e-Learning tutorial will guide you through the use of the EMBL-EBI web server MGnify to process and analyze multiple shotgun metagenomic datasets derived from a wet coffee fermentation process at different time points.

Essentials Metagenomics
Essentials Metagenomics Part I

In this course we present a review of essential aspects in metagenomic studies and analysis.

Essentials Metagenomics II
Essentials Metagenomics Part II

In this course we present a review of essential aspects in metagenomic data analysis.

Essentials Transcriptomics
Essentials Transcriptomics

This course will guide you through the basic concepts of design and analysis of next generation sequencing (NGS) experiments to study the transcriptome.

PracticalTranscriptomics
Practical Transcriptomics: differential gene expression applied to food production

This course will guide you through RNA-Seq data analysis in a practical way using the command line.

PractMetag
Practical Metagenomics: Microbiome tutorial with QIIME 2

This course will guide you through microbiome data analysis in a practical way using the command line.




PracticalMetagenomics
Practical Metagenomics: the Study of Human Gut Microbiome in Health and Disease

This tutorial will guide you through the analysis of shotgun metagenomic datasets derived from clinical samples (stool) in a practical way using command line and graphical user interfaces (GUIs).

snippets
Bioinformatics Snippets

Estos videos cortos muestran algunas herramientas para análisis bioinformático.

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